Posted in:

Description

Processes PET scans.

Can be run on

ManualPetProcessing.xml runs on PET sessions that have a corresponding MR session with T1.

Project Inputs

Name
Description
Allowed Values
T1
Label(s) of the T1s in the session
text
PET Scan Type
Scan type of the session
text
MST
Start time for model
numeric
MDT
Length of time of model
numeric
HL
Default half-life
1223 or 6586
FWHM
Full width at half maximum
numeric

Launch Inputs

Name
Description
Allowed Values
Atlas
Indicate which of the composite images the
resulting images should be registered to
select from dropdown
Select MRI Session and T1 scan id
Select ONE of the listed MR sessions to use
Select the Scan ID number for the T1 to be used
selected, unselected
Send additional emails
Indicate other emails the successful completion email
should be sent to
email addresses separated by commas




Outputs

The following will result from a successful completion of the pipeline:

  • The user who launched the pipeline will receive an email from the XNAT Team with the wording:
    "T1 Atlas registered image available..."
  • Files will be created in the Resources directory for the scan under a directory labeled MPRAGE...
    Screenshot of the MPRAGE directory.
    ManualPetFiles.jpg

Additional Information

NRG PET pipeline wiki

References


M.A. Minutn et al. (2006). PIB in a Nondemented Population: Potential Antecedent Marker of Alzheimer Disease. Neurology. doi
10.1212/01.wnl.0000228230.26044.a4