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Description

Computing of the Resting State Networks from BOLD studies using MLP.

Can be run on

Benice.xml runs on MR sessions with BOLD and MPRAGE scans.

Project Inputs

Name
Description
Allowed Values
epidir
Indicates what direction EPI slices were acquired
0, 1
0 = Inferior to Superior
1 = Superior to Inferior
gen_dcm
Indicate if DICOM scans of synthetic RSN maps should be added
to the session
Y, N
Y = yes
N = no

Launch Inputs

Name
Description
Allowed Values
fstd
Indicate the BOLD scans
Select at least one from available
mprs
Specify the MPRAGE scans
Select at least one from available
epidir
Same as in Project Inputs
gen_dcm
Same as in Project Inputs
project
Project Label
alphanumeric
subject
Subject Label
alphanumeric
xnat_id
MR Session Acession Number
alphanumeric
sessionId
MR Session Label
alphanumeric
run pipeline in-process

Checked = Yes
Unchecked = No
suppress workflow entries
for pipeline execution

Checked = Yes
Unchecked = No

Outputs

The following will result from a successful completion of the pipeline.

  • The user who launched the pipeline will receive an email from the XNAT Team with the wording:
    "CNDA update:synthetic RSN DICOM files generated for".
  • Files will be created in the Assessors/BENICE directory for the scan and under the folders FCmaps, Movement, Perceptron, atlas, QC.


Additional Information



References